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Quantifying protein dynamics in the ps-ns time regime by NMR relaxation

J Biomol NMR. 2016-10-01; 
Griselda Hernández, David M LeMaster
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Codon Optimization … Mustafi et al. 2013). Gene sequence for the B3 domain of streptococcal protein G (Hall and Fushman 2003) was chemically synthesized (Genscript), with codon optimization for expression in Escherichia coli. The gene sequences … Get A Quote

摘要

Both N chemical shift anisotropy (CSA) and sufficiently rapid exchange linebroadening transitions exhibit relaxation contributions that are proportional to the square of the magnetic field. Deconvoluting these contributions is further complicated by residue-dependent variations in protein amide N CSA values which have proven difficult to accurately measure. Exploiting recently reported improvements for the implementation of T and T experiments, field strength-dependent studies have been carried out on the B3 domain of protein G (GB3) as well as on the immunophilin FKBP12 and a H87V variant of that protein in which the major conformational exchange linebroadening transition is suppressed. By applying a zero freq... More

關鍵詞

Chemical shift anisotropy, Exchange linebroadening, FKBP12, Field strength dependence, GB3
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