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Identification and Characterisation CRN Effectors in Phytophthora capsici Shows Modularity and Functional Diversity.

PLoS ONE. 2013; 
StamRemco,JupeJulietta,HowdenAndrew J M,MorrisJenny A,BoevinkPetra C,HedleyPete E,HuitemaE
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摘要

Phytophthora species secrete a large array of effectors during infection of their host plants. The Crinkler (CRN) gene family encodes a ubiquitous but understudied class of effectors with possible but as of yet unknown roles in infection. To appreciate CRN effector function in Phytophthora, we devised a simple Crn gene identification and annotation pipeline to improve effector prediction rates. We predicted 84 full-length CRN coding genes and assessed CRN effector domain diversity in sequenced Oomycete genomes. These analyses revealed evidence of CRN domain innovation in Phytophthora and expansion in the Peronosporales. We performed gene expression analyses to validate and define two classes of CRN effectors?... More

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