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Refining the N-Termini of the SARS-CoV-2 Spike Protein and Its Discrete Receptor-Binding Domain

J Proteome Res. 2021-08; 
Robert A D'Ippolito, Matthew R Drew, Jennifer Mehalko, Kelly Snead, Vanessa Wall, Zoe Putman, Dominic Esposito, Caroline J DeHart
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Proteins, Expression, Isolation and Analysis … The purification of the constructs was then performed using nickel-charged magnetic beads (GenScript) equilibrated in 1× phosphate-buffered saline (PBS), which were added to harvested supernatants and allowed to mix for 1 h at RT. The beads were then washed with 1× PBS … Get A Quote

摘要

Previous work employing five SARS-CoV-2 spike protein receptor-binding domain (RBD) constructs, comprising versions originally developed by Mt. Sinai or the Ragon Institute and later optimized in-house, revealed potential heterogeneity which led to questions regarding variable seropositivity assay performance. Each construct was subjected to N-deglycosylation and subsequent intact mass analysis, revealing significant deviations from predicted theoretical mass for all five proteins. Complementary tandem MS/MS analysis revealed the presence of an additional pyroGlu residue on the N-termini of the two Mt. Sinai RBD constructs, as well as on the N-terminus of the full-length spike protein from which they were deriv... More

關鍵詞

COVID-19, SARS-CoV-2, bottom-up proteomics, intact mass, mass spectrometry, spike protein
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